Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Pds5bQ4VA53 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Pds5bQ4VA53 Gm1818-201ENSMUST00000169406 1184 ntBASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 AC121961.1-201ENSMUST00000218594 1779 ntBASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Gm18688-201ENSMUST00000204695 1859 ntBASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Gm12644-201ENSMUST00000119935 606 ntBASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Gm43575-201ENSMUST00000196420 516 ntBASIC30.98■■■□□ 2.55
Pds5bQ4VA53 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pds5bQ4VA53 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pds5bQ4VA53 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC30.97■■■□□ 2.55
Pds5bQ4VA53 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pds5bQ4VA53 Gm7935-201ENSMUST00000100555 1278 ntBASIC30.96■■■□□ 2.55
Pds5bQ4VA53 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Pds5bQ4VA53 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Pds5bQ4VA53 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Pds5bQ4VA53 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Pds5bQ4VA53 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Pds5bQ4VA53 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Pds5bQ4VA53 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Pds5bQ4VA53 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC30.95■■■□□ 2.54
Pds5bQ4VA53 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Pds5bQ4VA53 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
Pds5bQ4VA53 Zkscan4-202ENSMUST00000225845 1506 ntBASIC30.95■■■□□ 2.54
Pds5bQ4VA53 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Gm5264-201ENSMUST00000190584 848 ntBASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Gm5364-201ENSMUST00000216789 889 ntBASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Gm6296-201ENSMUST00000222599 943 ntBASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Rncr4-201ENSMUST00000194541 2234 ntBASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Pds5bQ4VA53 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
Pds5bQ4VA53 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC30.92■■■□□ 2.54
Pds5bQ4VA53 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
Pds5bQ4VA53 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm23935-201ENSMUST00000102303 57 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm24270-201ENSMUST00000102326 57 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm24245-201ENSMUST00000157318 57 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm6736-201ENSMUST00000166583 948 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44357-201ENSMUST00000195897 142 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm19658-201ENSMUST00000196231 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44367-201ENSMUST00000196836 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44350-201ENSMUST00000197197 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44390-201ENSMUST00000197533 144 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44313-201ENSMUST00000198018 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44486-201ENSMUST00000198508 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44454-201ENSMUST00000198541 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44314-201ENSMUST00000199263 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44394-201ENSMUST00000199558 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44484-201ENSMUST00000199873 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44466-201ENSMUST00000200264 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm44359-201ENSMUST00000200671 138 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Gm45906-201ENSMUST00000208911 1430 ntBASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Pds5bQ4VA53 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pds5bQ4VA53 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Pds5bQ4VA53 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Pds5bQ4VA53 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Pds5bQ4VA53 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
Pds5bQ4VA53 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC30.89■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms