Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Syne3Q4FZC9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Flg-201ENSMUST00000050758 1488 ntBASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Syne3Q4FZC9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Syne3Q4FZC9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Gm12896-201ENSMUST00000118430 226 ntBASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.77■□□□□ 0.6
Syne3Q4FZC9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Syne3Q4FZC9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Syne3Q4FZC9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.77■□□□□ 0.59
Syne3Q4FZC9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Syne3Q4FZC9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Syne3Q4FZC9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms