Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Tgds-204ENSMUST00000228543 1594 ntBASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim9Q3V0X1 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim9Q3V0X1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim9Q3V0X1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Cap2-205ENSMUST00000225824 1634 ntBASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim9Q3V0X1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim9Q3V0X1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim9Q3V0X1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Smim9Q3V0X1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim9Q3V0X1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim9Q3V0X1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms