Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim80Q3V061 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim80Q3V061 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim80Q3V061 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trim80Q3V061 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim80Q3V061 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim80Q3V061 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Mir5133-201ENSMUST00000174955 77 ntBASIC18.24■□□□□ 0.51
Trim80Q3V061 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Trim80Q3V061 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trim80Q3V061 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim80Q3V061 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim80Q3V061 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim80Q3V061 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.23■□□□□ 0.51
Trim80Q3V061 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim80Q3V061 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.23■□□□□ 0.51
Trim80Q3V061 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.23■□□□□ 0.51
Trim80Q3V061 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Trim80Q3V061 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim80Q3V061 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Gm7860-201ENSMUST00000121190 879 ntBASIC18.22■□□□□ 0.51
Trim80Q3V061 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.22■□□□□ 0.51
Trim80Q3V061 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim80Q3V061 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim80Q3V061 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim80Q3V061 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim80Q3V061 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim80Q3V061 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.21■□□□□ 0.51
Trim80Q3V061 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Nespas-201ENSMUST00000143738 1083 ntBASIC18.21■□□□□ 0.51
Trim80Q3V061 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim80Q3V061 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.21■□□□□ 0.51
Trim80Q3V061 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim80Q3V061 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms