Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn4Q3UWL8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn4Q3UWL8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn4Q3UWL8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pfdn4Q3UWL8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pfdn4Q3UWL8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.34■□□□□ 0.37
Pfdn4Q3UWL8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn4Q3UWL8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.33■□□□□ 0.37
Pfdn4Q3UWL8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn4Q3UWL8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn4Q3UWL8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pfdn4Q3UWL8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.33■□□□□ 0.36
Pfdn4Q3UWL8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pfdn4Q3UWL8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn4Q3UWL8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn4Q3UWL8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn4Q3UWL8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.29■□□□□ 0.36
Pfdn4Q3UWL8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn4Q3UWL8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn4Q3UWL8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn4Q3UWL8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn4Q3UWL8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms