Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1d1Q3UV55 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1d1Q3UV55 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1d1Q3UV55 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1d1Q3UV55 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nr1d1Q3UV55 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Nr1d1Q3UV55 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr1d1Q3UV55 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Gm7514-201ENSMUST00000209475 934 ntBASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr1d1Q3UV55 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nr1d1Q3UV55 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nr1d1Q3UV55 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.64■□□□□ 0.58
Nr1d1Q3UV55 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.64■□□□□ 0.58
Nr1d1Q3UV55 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Nr1d1Q3UV55 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nr1d1Q3UV55 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms