Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Gm11539-201ENSMUST00000119837 557 ntBASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Gm13436-201ENSMUST00000120418 567 ntBASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Gm9987-201ENSMUST00000069768 567 ntBASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf223Q3UV31 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Idnk-204ENSMUST00000226010 1898 ntBASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf223Q3UV31 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Gm6433-201ENSMUST00000118634 875 ntBASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Gm13559-201ENSMUST00000120476 863 ntBASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Gm38027-201ENSMUST00000192315 235 ntBASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf223Q3UV31 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf223Q3UV31 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Grk6-206ENSMUST00000224995 2971 ntBASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf223Q3UV31 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf223Q3UV31 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms