Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
B020004J07RikQ3UTC0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
B020004J07RikQ3UTC0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Gm7638-201ENSMUST00000121348 967 ntBASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Mir5130-201ENSMUST00000175160 84 ntBASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Gm7791-201ENSMUST00000219066 539 ntBASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
B020004J07RikQ3UTC0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
B020004J07RikQ3UTC0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Gm23634-201ENSMUST00000175071 91 ntBASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Gm2274-201ENSMUST00000184539 609 ntBASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
B020004J07RikQ3UTC0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.28■□□□□ 0.52
B020004J07RikQ3UTC0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
B020004J07RikQ3UTC0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
B020004J07RikQ3UTC0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
B020004J07RikQ3UTC0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
B020004J07RikQ3UTC0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
B020004J07RikQ3UTC0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms