Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Gm9731-201ENSMUST00000209480 747 ntBASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Il3ra-202ENSMUST00000223589 738 ntBASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fam196aQ3USH1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Gm27525-201ENSMUST00000184465 107 ntBASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Gm37722-201ENSMUST00000193757 208 ntBASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Gm10566-201ENSMUST00000086739 996 ntBASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fam196aQ3USH1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Gm11452-201ENSMUST00000122376 690 ntBASIC17.74■□□□□ 0.43
Fam196aQ3USH1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Gm18195-201ENSMUST00000207604 706 ntBASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fam196aQ3USH1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Gm13401-201ENSMUST00000117074 291 ntBASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fam196aQ3USH1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fam196aQ3USH1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fam196aQ3USH1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Fam196aQ3USH1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Fam196aQ3USH1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Fam196aQ3USH1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Gm37025-201ENSMUST00000195159 829 ntBASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fam196aQ3USH1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms