Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrk1Q3UHC2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrk1Q3UHC2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.43■□□□□ 0.22
Lrrk1Q3UHC2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrk1Q3UHC2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrk1Q3UHC2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrk1Q3UHC2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrk1Q3UHC2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Gm12085-201ENSMUST00000119263 940 ntBASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Timm23-208ENSMUST00000226683 750 ntBASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.41■□□□□ 0.22
Lrrk1Q3UHC2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Gm10819-201ENSMUST00000099988 561 ntBASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrk1Q3UHC2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrrk1Q3UHC2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Lrrk1Q3UHC2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lrrk1Q3UHC2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms