Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nhej1Q3KNJ2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nhej1Q3KNJ2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nhej1Q3KNJ2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nhej1Q3KNJ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Gm18671-201ENSMUST00000214826 683 ntBASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nhej1Q3KNJ2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nhej1Q3KNJ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nhej1Q3KNJ2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms