Protein–RNA interactions for Protein: P97358

Taf1b, TATA box-binding protein-associated factor RNA polymerase I subunit B, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1bP97358 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Taf1bP97358 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Taf1bP97358 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Taf1bP97358 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Taf1bP97358 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Taf1bP97358 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.68■□□□□ 0.74
Taf1bP97358 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Taf1bP97358 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.67■□□□□ 0.74
Taf1bP97358 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.67■□□□□ 0.74
Taf1bP97358 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Taf1bP97358 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.67■□□□□ 0.74
Taf1bP97358 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.67■□□□□ 0.74
Taf1bP97358 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Taf1bP97358 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Fst-202ENSMUST00000223640 2612 ntBASIC19.66■□□□□ 0.74
Taf1bP97358 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.66■□□□□ 0.74
Taf1bP97358 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.66■□□□□ 0.74
Taf1bP97358 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Taf1bP97358 Gm27463-201ENSMUST00000183569 57 ntBASIC19.66■□□□□ 0.74
Taf1bP97358 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Taf1bP97358 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.66■□□□□ 0.74
Taf1bP97358 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.66■□□□□ 0.74
Taf1bP97358 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Taf1bP97358 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.66■□□□□ 0.74
Taf1bP97358 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Taf1bP97358 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Taf1bP97358 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.65■□□□□ 0.74
Taf1bP97358 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.65■□□□□ 0.74
Taf1bP97358 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Taf1bP97358 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Taf1bP97358 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Taf1bP97358 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Taf1bP97358 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Taf1bP97358 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Taf1bP97358 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Taf1bP97358 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.64■□□□□ 0.73
Taf1bP97358 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Gm24841-201ENSMUST00000158676 357 ntBASIC19.64■□□□□ 0.73
Taf1bP97358 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Taf1bP97358 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Taf1bP97358 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Taf1bP97358 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms