Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CiitaP79621 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CiitaP79621 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CiitaP79621 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CiitaP79621 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.21■□□□□ 0.67
CiitaP79621 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Gm43799-201ENSMUST00000201845 579 ntBASIC19.21■□□□□ 0.67
CiitaP79621 Gm30025-201ENSMUST00000218555 728 ntBASIC19.21■□□□□ 0.67
CiitaP79621 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CiitaP79621 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CiitaP79621 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CiitaP79621 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CiitaP79621 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.2■□□□□ 0.66
CiitaP79621 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CiitaP79621 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CiitaP79621 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CiitaP79621 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CiitaP79621 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.2■□□□□ 0.66
CiitaP79621 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CiitaP79621 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 Gm38027-201ENSMUST00000192315 235 ntBASIC19.19■□□□□ 0.66
CiitaP79621 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CiitaP79621 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CiitaP79621 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.19■□□□□ 0.66
CiitaP79621 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.19■□□□□ 0.66
CiitaP79621 Idnk-204ENSMUST00000226010 1898 ntBASIC19.19■□□□□ 0.66
CiitaP79621 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CiitaP79621 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CiitaP79621 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Gm12085-201ENSMUST00000119263 940 ntBASIC19.18■□□□□ 0.66
CiitaP79621 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CiitaP79621 Gm13559-201ENSMUST00000120476 863 ntBASIC19.18■□□□□ 0.66
CiitaP79621 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CiitaP79621 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.18■□□□□ 0.66
CiitaP79621 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.18■□□□□ 0.66
CiitaP79621 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CiitaP79621 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.17■□□□□ 0.66
CiitaP79621 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.17■□□□□ 0.66
CiitaP79621 Gm11539-201ENSMUST00000119837 557 ntBASIC19.17■□□□□ 0.66
CiitaP79621 Gm13436-201ENSMUST00000120418 567 ntBASIC19.17■□□□□ 0.66
CiitaP79621 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.17■□□□□ 0.66
CiitaP79621 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.17■□□□□ 0.66
CiitaP79621 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CiitaP79621 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CiitaP79621 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Gm6433-201ENSMUST00000118634 875 ntBASIC19.16■□□□□ 0.66
CiitaP79621 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.16■□□□□ 0.66
CiitaP79621 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CiitaP79621 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CiitaP79621 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.16■□□□□ 0.66
CiitaP79621 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CiitaP79621 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms