Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Trmt13-210ENSMUST00000198454 880 ntBASIC14.73□□□□□ -0.05
Pdlim4P70271 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.73□□□□□ -0.05
Pdlim4P70271 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim4P70271 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim4P70271 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim4P70271 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.72□□□□□ -0.05
Pdlim4P70271 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Gm27275-201ENSMUST00000184318 272 ntBASIC14.72□□□□□ -0.05
Pdlim4P70271 Zfp783-201ENSMUST00000095946 670 ntBASIC14.72□□□□□ -0.05
Pdlim4P70271 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim4P70271 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim4P70271 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim4P70271 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdlim4P70271 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.71□□□□□ -0.05
Pdlim4P70271 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pdlim4P70271 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.71□□□□□ -0.05
Pdlim4P70271 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pdlim4P70271 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdlim4P70271 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Gm11927-201ENSMUST00000118472 759 ntBASIC14.71□□□□□ -0.05
Pdlim4P70271 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pdlim4P70271 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Gm37856-201ENSMUST00000191634 999 ntBASIC14.71□□□□□ -0.05
Pdlim4P70271 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.71□□□□□ -0.05
Pdlim4P70271 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.71□□□□□ -0.05
Pdlim4P70271 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim4P70271 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdlim4P70271 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim4P70271 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim4P70271 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Pdlim4P70271 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim4P70271 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.7□□□□□ -0.06
Pdlim4P70271 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Pdlim4P70271 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Gm20760-201ENSMUST00000179197 648 ntBASIC14.7□□□□□ -0.06
Pdlim4P70271 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Gm38285-201ENSMUST00000192928 922 ntBASIC14.7□□□□□ -0.06
Pdlim4P70271 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Pdlim4P70271 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim4P70271 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pdlim4P70271 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim4P70271 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim4P70271 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Gm10653-202ENSMUST00000139570 835 ntBASIC14.69□□□□□ -0.06
Pdlim4P70271 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim4P70271 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.69□□□□□ -0.06
Pdlim4P70271 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim4P70271 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim4P70271 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim4P70271 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms