Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six5P70178 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Six5P70178 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.56■□□□□ 0.24
Six5P70178 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.56■□□□□ 0.24
Six5P70178 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Six5P70178 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.56■□□□□ 0.24
Six5P70178 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Six5P70178 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.56■□□□□ 0.24
Six5P70178 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.56■□□□□ 0.24
Six5P70178 Gm20760-201ENSMUST00000179197 648 ntBASIC16.56■□□□□ 0.24
Six5P70178 Gm8969-201ENSMUST00000199694 526 ntBASIC16.56■□□□□ 0.24
Six5P70178 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.56■□□□□ 0.24
Six5P70178 Gm29791-202ENSMUST00000207888 369 ntBASIC16.56■□□□□ 0.24
Six5P70178 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Grk6-206ENSMUST00000224995 2971 ntBASIC16.56■□□□□ 0.24
Six5P70178 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.56■□□□□ 0.24
Six5P70178 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six5P70178 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
Six5P70178 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.55■□□□□ 0.24
Six5P70178 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.55■□□□□ 0.24
Six5P70178 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.55■□□□□ 0.24
Six5P70178 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six5P70178 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Six5P70178 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Six5P70178 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Six5P70178 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six5P70178 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Six5P70178 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.53■□□□□ 0.24
Six5P70178 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Six5P70178 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.53■□□□□ 0.24
Six5P70178 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six5P70178 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.52■□□□□ 0.24
Six5P70178 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six5P70178 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six5P70178 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six5P70178 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Six5P70178 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Six5P70178 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Six5P70178 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six5P70178 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Six5P70178 Idnk-204ENSMUST00000226010 1898 ntBASIC16.52■□□□□ 0.23
Six5P70178 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.52■□□□□ 0.23
Six5P70178 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms