Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.45■□□□□ 0.7
Hmgb1P63158 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgb1P63158 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.45■□□□□ 0.7
Hmgb1P63158 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgb1P63158 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgb1P63158 Flg-201ENSMUST00000050758 1488 ntBASIC19.45■□□□□ 0.7
Hmgb1P63158 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.45■□□□□ 0.7
Hmgb1P63158 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgb1P63158 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hmgb1P63158 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Hmgb1P63158 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Hmgb1P63158 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.44■□□□□ 0.7
Hmgb1P63158 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hmgb1P63158 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.44■□□□□ 0.7
Hmgb1P63158 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hmgb1P63158 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Hmgb1P63158 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hmgb1P63158 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hmgb1P63158 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Gm27405-201ENSMUST00000184201 112 ntBASIC19.43■□□□□ 0.7
Hmgb1P63158 Gm26524-201ENSMUST00000192339 390 ntBASIC19.43■□□□□ 0.7
Hmgb1P63158 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hmgb1P63158 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.43■□□□□ 0.7
Hmgb1P63158 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.43■□□□□ 0.7
Hmgb1P63158 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hmgb1P63158 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hmgb1P63158 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Hmgb1P63158 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmgb1P63158 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgb1P63158 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgb1P63158 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmgb1P63158 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmgb1P63158 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hmgb1P63158 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgb1P63158 Mir5133-201ENSMUST00000174955 77 ntBASIC19.42■□□□□ 0.7
Hmgb1P63158 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgb1P63158 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Hmgb1P63158 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgb1P63158 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hmgb1P63158 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hmgb1P63158 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Gm10418-201ENSMUST00000100943 576 ntBASIC19.41■□□□□ 0.7
Hmgb1P63158 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Gm13148-201ENSMUST00000118892 745 ntBASIC19.41■□□□□ 0.7
Hmgb1P63158 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Rab3c-203ENSMUST00000224180 967 ntBASIC19.41■□□□□ 0.7
Hmgb1P63158 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.41■□□□□ 0.7
Hmgb1P63158 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgb1P63158 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Hmgb1P63158 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hmgb1P63158 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.4■□□□□ 0.7
Hmgb1P63158 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgb1P63158 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms