Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx1P63006 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx1P63006 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx1P63006 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx1P63006 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx1P63006 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx1P63006 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.41■□□□□ 0.38
Lhx1P63006 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Lhx1P63006 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lhx1P63006 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Lhx1P63006 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.4■□□□□ 0.38
Lhx1P63006 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.4■□□□□ 0.38
Lhx1P63006 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
Lhx1P63006 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx1P63006 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lhx1P63006 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.39■□□□□ 0.37
Lhx1P63006 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.39■□□□□ 0.37
Lhx1P63006 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.39■□□□□ 0.37
Lhx1P63006 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lhx1P63006 Fst-202ENSMUST00000223640 2612 ntBASIC17.38■□□□□ 0.37
Lhx1P63006 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lhx1P63006 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.38■□□□□ 0.37
Lhx1P63006 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.38■□□□□ 0.37
Lhx1P63006 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Gm13401-201ENSMUST00000117074 291 ntBASIC17.38■□□□□ 0.37
Lhx1P63006 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.38■□□□□ 0.37
Lhx1P63006 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.38■□□□□ 0.37
Lhx1P63006 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.38■□□□□ 0.37
Lhx1P63006 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.38■□□□□ 0.37
Lhx1P63006 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.38■□□□□ 0.37
Lhx1P63006 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Gm5417-201ENSMUST00000079706 384 ntBASIC17.38■□□□□ 0.37
Lhx1P63006 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lhx1P63006 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.37■□□□□ 0.37
Lhx1P63006 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.37■□□□□ 0.37
Lhx1P63006 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Lhx1P63006 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lhx1P63006 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
Lhx1P63006 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.36■□□□□ 0.37
Lhx1P63006 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.36■□□□□ 0.37
Lhx1P63006 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lhx1P63006 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms