Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.21■□□□□ 0.19
Lsm3P62311 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Lsm3P62311 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.21■□□□□ 0.19
Lsm3P62311 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.21■□□□□ 0.19
Lsm3P62311 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lsm3P62311 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lsm3P62311 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lsm3P62311 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.21■□□□□ 0.19
Lsm3P62311 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm3P62311 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lsm3P62311 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lsm3P62311 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm3P62311 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.19■□□□□ 0.18
Lsm3P62311 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.19■□□□□ 0.18
Lsm3P62311 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.19■□□□□ 0.18
Lsm3P62311 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.19■□□□□ 0.18
Lsm3P62311 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lsm3P62311 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm3P62311 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lsm3P62311 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.18■□□□□ 0.18
Lsm3P62311 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lsm3P62311 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Dancr-204ENSMUST00000132389 2347 ntBASIC16.18■□□□□ 0.18
Lsm3P62311 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm3P62311 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.17■□□□□ 0.18
Lsm3P62311 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lsm3P62311 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.17■□□□□ 0.18
Lsm3P62311 Gm7417-201ENSMUST00000192950 473 ntBASIC16.17■□□□□ 0.18
Lsm3P62311 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lsm3P62311 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.17■□□□□ 0.18
Lsm3P62311 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm3P62311 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lsm3P62311 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Lsm3P62311 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.16■□□□□ 0.18
Lsm3P62311 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.16■□□□□ 0.18
Lsm3P62311 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm3P62311 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 163.1 ms