Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Sec61a1P61620 Mir5133-201ENSMUST00000174955 77 ntBASIC15.58■□□□□ 0.08
Sec61a1P61620 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.58■□□□□ 0.08
Sec61a1P61620 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.58■□□□□ 0.08
Sec61a1P61620 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.58■□□□□ 0.08
Sec61a1P61620 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sec61a1P61620 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Gm6365-201ENSMUST00000054711 744 ntBASIC15.57■□□□□ 0.08
Sec61a1P61620 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sec61a1P61620 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Sec61a1P61620 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a1P61620 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a1P61620 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a1P61620 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a1P61620 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sec61a1P61620 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.56■□□□□ 0.08
Sec61a1P61620 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.56■□□□□ 0.08
Sec61a1P61620 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a1P61620 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sec61a1P61620 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sec61a1P61620 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sec61a1P61620 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sec61a1P61620 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.55■□□□□ 0.08
Sec61a1P61620 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sec61a1P61620 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sec61a1P61620 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sec61a1P61620 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sec61a1P61620 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.54■□□□□ 0.08
Sec61a1P61620 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sec61a1P61620 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.54■□□□□ 0.08
Sec61a1P61620 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Gm13148-201ENSMUST00000118892 745 ntBASIC15.54■□□□□ 0.08
Sec61a1P61620 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.54■□□□□ 0.08
Sec61a1P61620 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.54■□□□□ 0.08
Sec61a1P61620 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sec61a1P61620 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sec61a1P61620 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sec61a1P61620 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms