Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cks1bP61025 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cks1bP61025 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.62□□□□□ -0.39
Cks1bP61025 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.62□□□□□ -0.39
Cks1bP61025 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.62□□□□□ -0.39
Cks1bP61025 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cks1bP61025 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.61□□□□□ -0.39
Cks1bP61025 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cks1bP61025 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.61□□□□□ -0.39
Cks1bP61025 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cks1bP61025 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.61□□□□□ -0.39
Cks1bP61025 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cks1bP61025 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.61□□□□□ -0.39
Cks1bP61025 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cks1bP61025 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cks1bP61025 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cks1bP61025 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.59□□□□□ -0.39
Cks1bP61025 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cks1bP61025 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cks1bP61025 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.59□□□□□ -0.39
Cks1bP61025 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.59□□□□□ -0.39
Cks1bP61025 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.59□□□□□ -0.39
Cks1bP61025 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1bP61025 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cks1bP61025 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cks1bP61025 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms