Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Tpm1P58771 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.78■□□□□ 0.76
Tpm1P58771 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.78■□□□□ 0.76
Tpm1P58771 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.78■□□□□ 0.76
Tpm1P58771 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tpm1P58771 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.78■□□□□ 0.76
Tpm1P58771 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Tpm1P58771 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tpm1P58771 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Tpm1P58771 Gm43017-201ENSMUST00000198296 752 ntBASIC19.77■□□□□ 0.76
Tpm1P58771 Gm43060-201ENSMUST00000200621 289 ntBASIC19.77■□□□□ 0.76
Tpm1P58771 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.77■□□□□ 0.76
Tpm1P58771 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tpm1P58771 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.77■□□□□ 0.76
Tpm1P58771 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tpm1P58771 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Tpm1P58771 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Tpm1P58771 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tpm1P58771 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tpm1P58771 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.76■□□□□ 0.75
Tpm1P58771 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.76■□□□□ 0.75
Tpm1P58771 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tpm1P58771 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Tpm1P58771 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.75■□□□□ 0.75
Tpm1P58771 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tpm1P58771 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.75■□□□□ 0.75
Tpm1P58771 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tpm1P58771 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tpm1P58771 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Tpm1P58771 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.73■□□□□ 0.75
Tpm1P58771 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Tpm1P58771 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tpm1P58771 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tpm1P58771 Gm9988-201ENSMUST00000069786 435 ntBASIC19.73■□□□□ 0.75
Tpm1P58771 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms