Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.34□□□□□ -0.11
Sssca1P56873 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.34□□□□□ -0.11
Sssca1P56873 Gm22325-201ENSMUST00000158904 308 ntBASIC14.34□□□□□ -0.11
Sssca1P56873 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.34□□□□□ -0.11
Sssca1P56873 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sssca1P56873 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sssca1P56873 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.33□□□□□ -0.11
Sssca1P56873 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sssca1P56873 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sssca1P56873 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sssca1P56873 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sssca1P56873 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sssca1P56873 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.33□□□□□ -0.12
Sssca1P56873 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.33□□□□□ -0.12
Sssca1P56873 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.33□□□□□ -0.12
Sssca1P56873 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.33□□□□□ -0.12
Sssca1P56873 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sssca1P56873 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sssca1P56873 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.32□□□□□ -0.12
Sssca1P56873 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sssca1P56873 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.32□□□□□ -0.12
Sssca1P56873 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sssca1P56873 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sssca1P56873 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.32□□□□□ -0.12
Sssca1P56873 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.31□□□□□ -0.12
Sssca1P56873 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sssca1P56873 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Gm13234-201ENSMUST00000120010 747 ntBASIC14.31□□□□□ -0.12
Sssca1P56873 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.31□□□□□ -0.12
Sssca1P56873 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sssca1P56873 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sssca1P56873 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sssca1P56873 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.3□□□□□ -0.12
Sssca1P56873 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sssca1P56873 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.3□□□□□ -0.12
Sssca1P56873 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.3□□□□□ -0.12
Sssca1P56873 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Sssca1P56873 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
Sssca1P56873 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.3□□□□□ -0.12
Sssca1P56873 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.3□□□□□ -0.12
Sssca1P56873 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sssca1P56873 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sssca1P56873 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms