Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SmoP56726 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SmoP56726 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SmoP56726 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.8■□□□□ 0.44
SmoP56726 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.8■□□□□ 0.44
SmoP56726 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.8■□□□□ 0.44
SmoP56726 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.8■□□□□ 0.44
SmoP56726 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SmoP56726 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SmoP56726 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SmoP56726 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.79■□□□□ 0.44
SmoP56726 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SmoP56726 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SmoP56726 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.79■□□□□ 0.44
SmoP56726 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.79■□□□□ 0.44
SmoP56726 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SmoP56726 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.79■□□□□ 0.44
SmoP56726 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SmoP56726 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SmoP56726 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SmoP56726 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SmoP56726 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SmoP56726 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.78■□□□□ 0.44
SmoP56726 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SmoP56726 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SmoP56726 Gm15565-201ENSMUST00000118890 427 ntBASIC17.78■□□□□ 0.44
SmoP56726 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SmoP56726 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.78■□□□□ 0.44
SmoP56726 Gm3375-201ENSMUST00000203929 796 ntBASIC17.78■□□□□ 0.44
SmoP56726 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SmoP56726 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SmoP56726 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SmoP56726 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Gm12085-201ENSMUST00000119263 940 ntBASIC17.77■□□□□ 0.44
SmoP56726 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.77■□□□□ 0.44
SmoP56726 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.77■□□□□ 0.44
SmoP56726 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SmoP56726 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.77■□□□□ 0.44
SmoP56726 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SmoP56726 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SmoP56726 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.77■□□□□ 0.43
SmoP56726 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SmoP56726 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SmoP56726 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SmoP56726 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SmoP56726 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.76■□□□□ 0.43
SmoP56726 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SmoP56726 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SmoP56726 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SmoP56726 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SmoP56726 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SmoP56726 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.75■□□□□ 0.43
SmoP56726 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.75■□□□□ 0.43
SmoP56726 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms