Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Mir2861-201ENSMUST00000175539 82 ntBASIC19.04■□□□□ 0.64
Nub1P54729 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.04■□□□□ 0.64
Nub1P54729 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nub1P54729 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.04■□□□□ 0.64
Nub1P54729 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nub1P54729 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Nub1P54729 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Nub1P54729 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nub1P54729 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nub1P54729 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.03■□□□□ 0.64
Nub1P54729 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Gm10138-203ENSMUST00000206952 366 ntBASIC19.03■□□□□ 0.64
Nub1P54729 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.03■□□□□ 0.64
Nub1P54729 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nub1P54729 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nub1P54729 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.02■□□□□ 0.64
Nub1P54729 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nub1P54729 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Gm5643-201ENSMUST00000117081 966 ntBASIC19.02■□□□□ 0.64
Nub1P54729 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.02■□□□□ 0.64
Nub1P54729 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nub1P54729 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nub1P54729 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Nub1P54729 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Nub1P54729 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.01■□□□□ 0.63
Nub1P54729 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nub1P54729 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.01■□□□□ 0.63
Nub1P54729 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.01■□□□□ 0.63
Nub1P54729 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nub1P54729 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nub1P54729 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nub1P54729 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.01■□□□□ 0.63
Nub1P54729 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.01■□□□□ 0.63
Nub1P54729 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nub1P54729 Gm15375-201ENSMUST00000119510 849 ntBASIC19■□□□□ 0.63
Nub1P54729 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Nub1P54729 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Nub1P54729 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nub1P54729 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nub1P54729 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nub1P54729 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nub1P54729 Nrn1-203ENSMUST00000223611 1443 ntBASIC19■□□□□ 0.63
Nub1P54729 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nub1P54729 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.99■□□□□ 0.63
Nub1P54729 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nub1P54729 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Nub1P54729 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.99■□□□□ 0.63
Nub1P54729 Gm18666-201ENSMUST00000190039 958 ntBASIC18.99■□□□□ 0.63
Nub1P54729 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Nub1P54729 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.99■□□□□ 0.63
Nub1P54729 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nub1P54729 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nub1P54729 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nub1P54729 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nub1P54729 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.98■□□□□ 0.63
Nub1P54729 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nub1P54729 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms