Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sox3P53784 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.93■□□□□ 0.3
Sox3P53784 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sox3P53784 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sox3P53784 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Gm13559-201ENSMUST00000120476 863 ntBASIC16.92■□□□□ 0.3
Sox3P53784 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox3P53784 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox3P53784 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox3P53784 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
Sox3P53784 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Sox3P53784 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.91■□□□□ 0.3
Sox3P53784 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox3P53784 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sox3P53784 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.91■□□□□ 0.3
Sox3P53784 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox3P53784 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.91■□□□□ 0.3
Sox3P53784 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox3P53784 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.9■□□□□ 0.3
Sox3P53784 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sox3P53784 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox3P53784 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Sox3P53784 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox3P53784 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox3P53784 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sox3P53784 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox3P53784 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sox3P53784 Gm18101-201ENSMUST00000215769 548 ntBASIC16.89■□□□□ 0.29
Sox3P53784 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sox3P53784 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.89■□□□□ 0.29
Sox3P53784 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox3P53784 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.88■□□□□ 0.29
Sox3P53784 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.88■□□□□ 0.29
Sox3P53784 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox3P53784 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Sox3P53784 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.87■□□□□ 0.29
Sox3P53784 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.87■□□□□ 0.29
Sox3P53784 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.87■□□□□ 0.29
Sox3P53784 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sox3P53784 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox3P53784 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms