Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.28■□□□□ 0.68
Ccr1P51675 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ccr1P51675 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ccr1P51675 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr1P51675 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccr1P51675 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ccr1P51675 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1P51675 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.27■□□□□ 0.68
Ccr1P51675 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.27■□□□□ 0.68
Ccr1P51675 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1P51675 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1P51675 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1P51675 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr1P51675 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr1P51675 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr1P51675 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr1P51675 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr1P51675 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Ccr1P51675 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccr1P51675 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccr1P51675 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccr1P51675 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccr1P51675 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.26■□□□□ 0.67
Ccr1P51675 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccr1P51675 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr1P51675 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccr1P51675 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccr1P51675 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Ccr1P51675 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccr1P51675 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr1P51675 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccr1P51675 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccr1P51675 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.24■□□□□ 0.67
Ccr1P51675 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccr1P51675 Gm24841-201ENSMUST00000158676 357 ntBASIC19.24■□□□□ 0.67
Ccr1P51675 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccr1P51675 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ccr1P51675 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccr1P51675 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccr1P51675 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccr1P51675 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ccr1P51675 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr1P51675 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1P51675 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1P51675 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1P51675 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1P51675 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1P51675 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr1P51675 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccr1P51675 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccr1P51675 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccr1P51675 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccr1P51675 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Ccr1P51675 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.22■□□□□ 0.67
Ccr1P51675 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.22■□□□□ 0.67
Ccr1P51675 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr1P51675 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccr1P51675 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ccr1P51675 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms