Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.63□□□□□ -0.55
Xcl1P47993 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Xcl1P47993 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Xcl1P47993 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Xcl1P47993 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.62□□□□□ -0.55
Xcl1P47993 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Xcl1P47993 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Xcl1P47993 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Xcl1P47993 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Xcl1P47993 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Xcl1P47993 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Xcl1P47993 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Xcl1P47993 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.61□□□□□ -0.55
Xcl1P47993 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Xcl1P47993 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Xcl1P47993 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Xcl1P47993 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Gm28536-201ENSMUST00000190971 1317 ntBASIC11.6□□□□□ -0.55
Xcl1P47993 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.6□□□□□ -0.55
Xcl1P47993 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Xcl1P47993 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Xcl1P47993 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Xcl1P47993 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.6□□□□□ -0.55
Xcl1P47993 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Xcl1P47993 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.59□□□□□ -0.55
Xcl1P47993 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.59□□□□□ -0.55
Xcl1P47993 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.59□□□□□ -0.55
Xcl1P47993 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.59□□□□□ -0.55
Xcl1P47993 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Xcl1P47993 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms