Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-6P43688 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-6P43688 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Nkx2-6P43688 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.72■□□□□ 0.27
Nkx2-6P43688 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.72■□□□□ 0.27
Nkx2-6P43688 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-6P43688 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.72■□□□□ 0.27
Nkx2-6P43688 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-6P43688 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.71■□□□□ 0.27
Nkx2-6P43688 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Gm7889-201ENSMUST00000185591 958 ntBASIC16.7■□□□□ 0.26
Nkx2-6P43688 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-6P43688 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-6P43688 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms