Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox18P43680 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sox18P43680 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox18P43680 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox18P43680 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.91■□□□□ 0.3
Sox18P43680 Gm27389-201ENSMUST00000183622 195 ntBASIC16.91■□□□□ 0.3
Sox18P43680 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Sox18P43680 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox18P43680 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox18P43680 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sox18P43680 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sox18P43680 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sox18P43680 Gm13474-201ENSMUST00000122466 815 ntBASIC16.9■□□□□ 0.3
Sox18P43680 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Sox18P43680 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.9■□□□□ 0.3
Sox18P43680 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Sox18P43680 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.9■□□□□ 0.3
Sox18P43680 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sox18P43680 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.9■□□□□ 0.3
Sox18P43680 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sox18P43680 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.9■□□□□ 0.3
Sox18P43680 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox18P43680 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Sox18P43680 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Sox18P43680 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sox18P43680 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sox18P43680 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox18P43680 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.89■□□□□ 0.29
Sox18P43680 Gm17808-201ENSMUST00000200859 894 ntBASIC16.89■□□□□ 0.29
Sox18P43680 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.89■□□□□ 0.29
Sox18P43680 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox18P43680 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Sox18P43680 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.88■□□□□ 0.29
Sox18P43680 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Sox18P43680 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
Sox18P43680 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sox18P43680 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox18P43680 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.88■□□□□ 0.29
Sox18P43680 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sox18P43680 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox18P43680 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.88■□□□□ 0.29
Sox18P43680 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sox18P43680 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.87■□□□□ 0.29
Sox18P43680 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.87■□□□□ 0.29
Sox18P43680 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.87■□□□□ 0.29
Sox18P43680 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.87■□□□□ 0.29
Sox18P43680 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sox18P43680 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sox18P43680 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 Golph3-205ENSMUST00000228671 2842 ntBASIC16.87■□□□□ 0.29
Sox18P43680 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sox18P43680 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms