Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.87■□□□□ 0.77
Sdc2P43407 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdc2P43407 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Sdc2P43407 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.86■□□□□ 0.77
Sdc2P43407 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Sdc2P43407 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdc2P43407 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sdc2P43407 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Gm8495-201ENSMUST00000188740 694 ntBASIC19.85■□□□□ 0.77
Sdc2P43407 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sdc2P43407 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdc2P43407 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.84■□□□□ 0.77
Sdc2P43407 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sdc2P43407 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sdc2P43407 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sdc2P43407 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.84■□□□□ 0.77
Sdc2P43407 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.84■□□□□ 0.77
Sdc2P43407 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sdc2P43407 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc2P43407 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc2P43407 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.83■□□□□ 0.77
Sdc2P43407 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc2P43407 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc2P43407 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.83■□□□□ 0.77
Sdc2P43407 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc2P43407 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdc2P43407 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Sdc2P43407 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdc2P43407 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sdc2P43407 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Gm2399-201ENSMUST00000104944 225 ntBASIC19.82■□□□□ 0.76
Sdc2P43407 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.82■□□□□ 0.76
Sdc2P43407 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc2P43407 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sdc2P43407 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
Sdc2P43407 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.81■□□□□ 0.76
Sdc2P43407 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.81■□□□□ 0.76
Sdc2P43407 Gm38285-201ENSMUST00000192928 922 ntBASIC19.81■□□□□ 0.76
Sdc2P43407 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms