Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca1P41233 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Gm6345-202ENSMUST00000180900 204 ntBASIC14.66□□□□□ -0.06
Abca1P41233 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Abca1P41233 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca1P41233 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Abca1P41233 Gm37292-201ENSMUST00000192062 758 ntBASIC14.66□□□□□ -0.06
Abca1P41233 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.66□□□□□ -0.06
Abca1P41233 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.66□□□□□ -0.06
Abca1P41233 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Abca1P41233 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Abca1P41233 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.65□□□□□ -0.06
Abca1P41233 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Abca1P41233 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Abca1P41233 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Abca1P41233 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Gm18032-201ENSMUST00000222541 538 ntBASIC14.65□□□□□ -0.06
Abca1P41233 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Abca1P41233 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Abca1P41233 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.65□□□□□ -0.06
Abca1P41233 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca1P41233 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Abca1P41233 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Abca1P41233 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Abca1P41233 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Abca1P41233 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca1P41233 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.63□□□□□ -0.07
Abca1P41233 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Abca1P41233 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.63□□□□□ -0.07
Abca1P41233 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.63□□□□□ -0.07
Abca1P41233 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Abca1P41233 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Abca1P41233 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.63□□□□□ -0.07
Abca1P41233 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca1P41233 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.62□□□□□ -0.07
Abca1P41233 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Abca1P41233 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms