Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Gm10517-202ENSMUST00000192970 758 ntBASIC14.61□□□□□ -0.07
Cdkn1aP39689 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.61□□□□□ -0.07
Cdkn1aP39689 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdkn1aP39689 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdkn1aP39689 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Gm21814-202ENSMUST00000203277 873 ntBASIC14.59□□□□□ -0.07
Cdkn1aP39689 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.59□□□□□ -0.07
Cdkn1aP39689 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdkn1aP39689 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1aP39689 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdkn1aP39689 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Gm10418-201ENSMUST00000100943 576 ntBASIC14.58□□□□□ -0.08
Cdkn1aP39689 Gm13836-201ENSMUST00000121159 501 ntBASIC14.58□□□□□ -0.08
Cdkn1aP39689 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Gm30025-201ENSMUST00000218555 728 ntBASIC14.58□□□□□ -0.08
Cdkn1aP39689 Odf3b-204ENSMUST00000227834 930 ntBASIC14.58□□□□□ -0.08
Cdkn1aP39689 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.58□□□□□ -0.08
Cdkn1aP39689 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Cdkn1aP39689 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Gm12085-201ENSMUST00000119263 940 ntBASIC14.57□□□□□ -0.08
Cdkn1aP39689 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.57□□□□□ -0.08
Cdkn1aP39689 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdkn1aP39689 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms