Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfc1P35601 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rfc1P35601 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Gm27801-201ENSMUST00000184174 223 ntBASIC18.65■□□□□ 0.58
Rfc1P35601 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.65■□□□□ 0.58
Rfc1P35601 Gm40848-201ENSMUST00000221998 324 ntBASIC18.65■□□□□ 0.58
Rfc1P35601 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rfc1P35601 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfc1P35601 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rfc1P35601 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc1P35601 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rfc1P35601 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc1P35601 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rfc1P35601 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rfc1P35601 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfc1P35601 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rfc1P35601 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfc1P35601 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfc1P35601 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfc1P35601 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.63■□□□□ 0.57
Rfc1P35601 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rfc1P35601 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rfc1P35601 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.63■□□□□ 0.57
Rfc1P35601 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfc1P35601 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Rfc1P35601 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.62■□□□□ 0.57
Rfc1P35601 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.62■□□□□ 0.57
Rfc1P35601 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.62■□□□□ 0.57
Rfc1P35601 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.62■□□□□ 0.57
Rfc1P35601 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rfc1P35601 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rfc1P35601 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.62■□□□□ 0.57
Rfc1P35601 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rfc1P35601 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfc1P35601 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rfc1P35601 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rfc1P35601 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.61■□□□□ 0.57
Rfc1P35601 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.61■□□□□ 0.57
Rfc1P35601 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfc1P35601 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rfc1P35601 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.6■□□□□ 0.57
Rfc1P35601 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.6■□□□□ 0.57
Rfc1P35601 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfc1P35601 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms