Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Thbs1P35441 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Thbs1P35441 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Gm11927-201ENSMUST00000118472 759 ntBASIC16.36■□□□□ 0.21
Thbs1P35441 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.36■□□□□ 0.21
Thbs1P35441 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Thbs1P35441 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.35■□□□□ 0.21
Thbs1P35441 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Mir2861-201ENSMUST00000175539 82 ntBASIC16.35■□□□□ 0.21
Thbs1P35441 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Thbs1P35441 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Thbs1P35441 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.35■□□□□ 0.21
Thbs1P35441 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Thbs1P35441 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
Thbs1P35441 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.34■□□□□ 0.21
Thbs1P35441 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.34■□□□□ 0.21
Thbs1P35441 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Thbs1P35441 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Thbs1P35441 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Thbs1P35441 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Thbs1P35441 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Thbs1P35441 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.33■□□□□ 0.21
Thbs1P35441 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Thbs1P35441 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Thbs1P35441 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.33■□□□□ 0.2
Thbs1P35441 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.33■□□□□ 0.2
Thbs1P35441 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.33■□□□□ 0.2
Thbs1P35441 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.33■□□□□ 0.2
Thbs1P35441 Gm2559-201ENSMUST00000201323 363 ntBASIC16.33■□□□□ 0.2
Thbs1P35441 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.33■□□□□ 0.2
Thbs1P35441 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Thbs1P35441 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Thbs1P35441 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Thbs1P35441 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Thbs1P35441 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Thbs1P35441 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.32■□□□□ 0.2
Thbs1P35441 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Thbs1P35441 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Thbs1P35441 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms