Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mmp13P33435 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mmp13P33435 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.12■□□□□ 0.49
Mmp13P33435 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.12■□□□□ 0.49
Mmp13P33435 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.12■□□□□ 0.49
Mmp13P33435 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.12■□□□□ 0.49
Mmp13P33435 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mmp13P33435 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Mmp13P33435 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mmp13P33435 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Mmp13P33435 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Mmp13P33435 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Mmp13P33435 Gm22325-201ENSMUST00000158904 308 ntBASIC18.11■□□□□ 0.49
Mmp13P33435 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.11■□□□□ 0.49
Mmp13P33435 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.11■□□□□ 0.49
Mmp13P33435 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.11■□□□□ 0.49
Mmp13P33435 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Mmp13P33435 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.11■□□□□ 0.49
Mmp13P33435 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mmp13P33435 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.1■□□□□ 0.49
Mmp13P33435 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Mmp13P33435 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.1■□□□□ 0.49
Mmp13P33435 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Mmp13P33435 Gm12441-201ENSMUST00000121806 588 ntBASIC18.1■□□□□ 0.49
Mmp13P33435 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.1■□□□□ 0.49
Mmp13P33435 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Mmp13P33435 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mmp13P33435 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp13P33435 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Mmp13P33435 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp13P33435 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.09■□□□□ 0.49
Mmp13P33435 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Mmp13P33435 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.09■□□□□ 0.49
Mmp13P33435 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Mmp13P33435 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Mmp13P33435 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Mmp13P33435 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Mmp13P33435 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.08■□□□□ 0.49
Mmp13P33435 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp13P33435 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.08■□□□□ 0.49
Mmp13P33435 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp13P33435 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp13P33435 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp13P33435 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mmp13P33435 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.08■□□□□ 0.48
Mmp13P33435 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Mmp13P33435 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Gm4968-201ENSMUST00000071458 858 ntBASIC18.08■□□□□ 0.48
Mmp13P33435 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Mmp13P33435 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.08■□□□□ 0.48
Mmp13P33435 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Mmp13P33435 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms