Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rom1P32958 Gm22325-201ENSMUST00000158904 308 ntBASIC14.05□□□□□ -0.16
Rom1P32958 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rom1P32958 Gm38205-201ENSMUST00000192243 258 ntBASIC14.05□□□□□ -0.16
Rom1P32958 Gm45102-201ENSMUST00000207427 857 ntBASIC14.05□□□□□ -0.16
Rom1P32958 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Rom1P32958 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.05□□□□□ -0.16
Rom1P32958 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rom1P32958 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rom1P32958 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rom1P32958 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.04□□□□□ -0.16
Rom1P32958 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rom1P32958 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Idnk-204ENSMUST00000226010 1898 ntBASIC14.04□□□□□ -0.16
Rom1P32958 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.04□□□□□ -0.16
Rom1P32958 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.04□□□□□ -0.16
Rom1P32958 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.04□□□□□ -0.16
Rom1P32958 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rom1P32958 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rom1P32958 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.03□□□□□ -0.16
Rom1P32958 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.03□□□□□ -0.16
Rom1P32958 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rom1P32958 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rom1P32958 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rom1P32958 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Rom1P32958 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.03□□□□□ -0.16
Rom1P32958 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rom1P32958 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.03□□□□□ -0.16
Rom1P32958 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.03□□□□□ -0.16
Rom1P32958 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Rom1P32958 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rom1P32958 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rom1P32958 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rom1P32958 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.02□□□□□ -0.16
Rom1P32958 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rom1P32958 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rom1P32958 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Rom1P32958 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.02□□□□□ -0.17
Rom1P32958 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rom1P32958 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rom1P32958 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.01□□□□□ -0.17
Rom1P32958 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rom1P32958 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms