Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.18■□□□□ 0.5
Nfkb1P25799 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nfkb1P25799 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Nfkb1P25799 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.18■□□□□ 0.5
Nfkb1P25799 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nfkb1P25799 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nfkb1P25799 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.17■□□□□ 0.5
Nfkb1P25799 Gm11539-201ENSMUST00000119837 557 ntBASIC18.17■□□□□ 0.5
Nfkb1P25799 Gm13436-201ENSMUST00000120418 567 ntBASIC18.17■□□□□ 0.5
Nfkb1P25799 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.17■□□□□ 0.5
Nfkb1P25799 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nfkb1P25799 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.17■□□□□ 0.5
Nfkb1P25799 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nfkb1P25799 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Gm12085-201ENSMUST00000119263 940 ntBASIC18.16■□□□□ 0.5
Nfkb1P25799 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.16■□□□□ 0.5
Nfkb1P25799 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.16■□□□□ 0.5
Nfkb1P25799 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.16■□□□□ 0.5
Nfkb1P25799 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nfkb1P25799 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nfkb1P25799 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nfkb1P25799 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nfkb1P25799 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.15■□□□□ 0.5
Nfkb1P25799 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nfkb1P25799 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nfkb1P25799 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.15■□□□□ 0.5
Nfkb1P25799 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Gm13559-201ENSMUST00000120476 863 ntBASIC18.15■□□□□ 0.5
Nfkb1P25799 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.15■□□□□ 0.5
Nfkb1P25799 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nfkb1P25799 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
Nfkb1P25799 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nfkb1P25799 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nfkb1P25799 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nfkb1P25799 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Nfkb1P25799 Gm10231-201ENSMUST00000181584 441 ntBASIC18.14■□□□□ 0.49
Nfkb1P25799 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Gm10175-202ENSMUST00000208752 441 ntBASIC18.14■□□□□ 0.49
Nfkb1P25799 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.14■□□□□ 0.49
Nfkb1P25799 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nfkb1P25799 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nfkb1P25799 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.13■□□□□ 0.49
Nfkb1P25799 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nfkb1P25799 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.13■□□□□ 0.49
Nfkb1P25799 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nfkb1P25799 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.13■□□□□ 0.49
Nfkb1P25799 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.13■□□□□ 0.49
Nfkb1P25799 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Nfkb1P25799 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nfkb1P25799 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms