Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Mir6349-201ENSMUST00000184059 97 ntBASIC14.79□□□□□ -0.04
Col8a2P25318 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.79□□□□□ -0.04
Col8a2P25318 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col8a2P25318 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.78□□□□□ -0.04
Col8a2P25318 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.78□□□□□ -0.04
Col8a2P25318 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.78□□□□□ -0.04
Col8a2P25318 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.78□□□□□ -0.04
Col8a2P25318 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col8a2P25318 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col8a2P25318 Idnk-204ENSMUST00000226010 1898 ntBASIC14.78□□□□□ -0.04
Col8a2P25318 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col8a2P25318 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.77□□□□□ -0.04
Col8a2P25318 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col8a2P25318 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Col8a2P25318 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col8a2P25318 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col8a2P25318 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Col8a2P25318 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col8a2P25318 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col8a2P25318 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.76□□□□□ -0.05
Col8a2P25318 Gm10517-202ENSMUST00000192970 758 ntBASIC14.76□□□□□ -0.05
Col8a2P25318 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Col8a2P25318 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.76□□□□□ -0.05
Col8a2P25318 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col8a2P25318 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.75□□□□□ -0.05
Col8a2P25318 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.75□□□□□ -0.05
Col8a2P25318 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.75□□□□□ -0.05
Col8a2P25318 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Col8a2P25318 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.75□□□□□ -0.05
Col8a2P25318 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.75□□□□□ -0.05
Col8a2P25318 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.75□□□□□ -0.05
Col8a2P25318 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col8a2P25318 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col8a2P25318 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.75□□□□□ -0.05
Col8a2P25318 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col8a2P25318 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms