Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.27■□□□□ 0.68
Pde6bP23440 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pde6bP23440 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pde6bP23440 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pde6bP23440 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pde6bP23440 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Pde6bP23440 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Pde6bP23440 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.26■□□□□ 0.67
Pde6bP23440 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6bP23440 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.25■□□□□ 0.67
Pde6bP23440 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.25■□□□□ 0.67
Pde6bP23440 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.25■□□□□ 0.67
Pde6bP23440 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.25■□□□□ 0.67
Pde6bP23440 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.25■□□□□ 0.67
Pde6bP23440 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pde6bP23440 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.25■□□□□ 0.67
Pde6bP23440 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6bP23440 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.24■□□□□ 0.67
Pde6bP23440 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.24■□□□□ 0.67
Pde6bP23440 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pde6bP23440 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pde6bP23440 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.24■□□□□ 0.67
Pde6bP23440 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Gm7889-201ENSMUST00000185591 958 ntBASIC19.24■□□□□ 0.67
Pde6bP23440 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Pde6bP23440 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6bP23440 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.23■□□□□ 0.67
Pde6bP23440 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.23■□□□□ 0.67
Pde6bP23440 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pde6bP23440 Mir2861-201ENSMUST00000175539 82 ntBASIC19.23■□□□□ 0.67
Pde6bP23440 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pde6bP23440 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.23■□□□□ 0.67
Pde6bP23440 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pde6bP23440 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6bP23440 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.22■□□□□ 0.67
Pde6bP23440 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.22■□□□□ 0.67
Pde6bP23440 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6bP23440 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.21■□□□□ 0.67
Pde6bP23440 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.21■□□□□ 0.67
Pde6bP23440 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.21■□□□□ 0.67
Pde6bP23440 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6bP23440 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms