Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.25■□□□□ 0.19
Hmgn1P18608 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.25■□□□□ 0.19
Hmgn1P18608 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hmgn1P18608 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.24■□□□□ 0.19
Hmgn1P18608 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
Hmgn1P18608 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.24■□□□□ 0.19
Hmgn1P18608 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Hmgn1P18608 Gm13234-201ENSMUST00000120010 747 ntBASIC16.24■□□□□ 0.19
Hmgn1P18608 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.24■□□□□ 0.19
Hmgn1P18608 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hmgn1P18608 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Hmgn1P18608 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hmgn1P18608 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.23■□□□□ 0.19
Hmgn1P18608 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hmgn1P18608 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.22■□□□□ 0.19
Hmgn1P18608 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgn1P18608 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgn1P18608 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hmgn1P18608 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hmgn1P18608 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hmgn1P18608 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Hmgn1P18608 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Hmgn1P18608 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hmgn1P18608 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hmgn1P18608 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Hmgn1P18608 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.2■□□□□ 0.18
Hmgn1P18608 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.2■□□□□ 0.18
Hmgn1P18608 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.2■□□□□ 0.18
Hmgn1P18608 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Hmgn1P18608 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hmgn1P18608 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.19■□□□□ 0.18
Hmgn1P18608 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
Hmgn1P18608 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hmgn1P18608 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgn1P18608 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.19■□□□□ 0.18
Hmgn1P18608 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms