Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.96■□□□□ 0.31
Cntn1P12960 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cntn1P12960 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cntn1P12960 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.96■□□□□ 0.3
Cntn1P12960 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.95■□□□□ 0.3
Cntn1P12960 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cntn1P12960 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.95■□□□□ 0.3
Cntn1P12960 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.95■□□□□ 0.3
Cntn1P12960 Gm15565-201ENSMUST00000118890 427 ntBASIC16.95■□□□□ 0.3
Cntn1P12960 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.95■□□□□ 0.3
Cntn1P12960 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.95■□□□□ 0.3
Cntn1P12960 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.95■□□□□ 0.3
Cntn1P12960 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cntn1P12960 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cntn1P12960 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.94■□□□□ 0.3
Cntn1P12960 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cntn1P12960 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.94■□□□□ 0.3
Cntn1P12960 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.94■□□□□ 0.3
Cntn1P12960 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Gm5417-201ENSMUST00000079706 384 ntBASIC16.94■□□□□ 0.3
Cntn1P12960 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.94■□□□□ 0.3
Cntn1P12960 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cntn1P12960 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cntn1P12960 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.93■□□□□ 0.3
Cntn1P12960 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.93■□□□□ 0.3
Cntn1P12960 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Cntn1P12960 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cntn1P12960 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.93■□□□□ 0.3
Cntn1P12960 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.93■□□□□ 0.3
Cntn1P12960 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cntn1P12960 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cntn1P12960 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cntn1P12960 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.93■□□□□ 0.3
Cntn1P12960 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cntn1P12960 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.92■□□□□ 0.3
Cntn1P12960 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.92■□□□□ 0.3
Cntn1P12960 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.92■□□□□ 0.3
Cntn1P12960 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cntn1P12960 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cntn1P12960 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cntn1P12960 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cntn1P12960 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.91■□□□□ 0.3
Cntn1P12960 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.91■□□□□ 0.3
Cntn1P12960 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cntn1P12960 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cntn1P12960 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Cntn1P12960 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms