Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hoxc6P10629 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.7■□□□□ 0.74
Hoxc6P10629 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxc6P10629 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hoxc6P10629 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc6P10629 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hoxc6P10629 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.69■□□□□ 0.74
Hoxc6P10629 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Gm13401-201ENSMUST00000117074 291 ntBASIC19.69■□□□□ 0.74
Hoxc6P10629 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Gm17971-201ENSMUST00000190239 806 ntBASIC19.69■□□□□ 0.74
Hoxc6P10629 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxc6P10629 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc6P10629 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxc6P10629 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc6P10629 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.68■□□□□ 0.74
Hoxc6P10629 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc6P10629 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.68■□□□□ 0.74
Hoxc6P10629 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc6P10629 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.68■□□□□ 0.74
Hoxc6P10629 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Hoxc6P10629 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc6P10629 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.67■□□□□ 0.74
Hoxc6P10629 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.67■□□□□ 0.74
Hoxc6P10629 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.67■□□□□ 0.74
Hoxc6P10629 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc6P10629 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.67■□□□□ 0.74
Hoxc6P10629 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hoxc6P10629 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc6P10629 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hoxc6P10629 Il3ra-202ENSMUST00000223589 738 ntBASIC19.66■□□□□ 0.74
Hoxc6P10629 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc6P10629 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hoxc6P10629 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.65■□□□□ 0.74
Hoxc6P10629 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.65■□□□□ 0.74
Hoxc6P10629 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Gm29518-201ENSMUST00000190858 372 ntBASIC19.65■□□□□ 0.74
Hoxc6P10629 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxc6P10629 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.65■□□□□ 0.74
Hoxc6P10629 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hoxc6P10629 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc6P10629 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Hoxc6P10629 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc6P10629 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc6P10629 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxc6P10629 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxc6P10629 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc6P10629 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.63■□□□□ 0.73
Hoxc6P10629 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc6P10629 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms