Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Zfp28P10078 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp28P10078 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp28P10078 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.32■□□□□ 0.2
Zfp28P10078 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp28P10078 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zfp28P10078 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Zfp28P10078 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zfp28P10078 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.31■□□□□ 0.2
Zfp28P10078 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zfp28P10078 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zfp28P10078 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Zfp28P10078 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zfp28P10078 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zfp28P10078 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Zfp28P10078 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zfp28P10078 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Zfp28P10078 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Zfp28P10078 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.3■□□□□ 0.2
Zfp28P10078 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zfp28P10078 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Zfp28P10078 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Zfp28P10078 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.29■□□□□ 0.2
Zfp28P10078 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Zfp28P10078 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Zfp28P10078 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zfp28P10078 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Zfp28P10078 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Zfp28P10078 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Zfp28P10078 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.28■□□□□ 0.2
Zfp28P10078 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Zfp28P10078 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Zfp28P10078 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.28■□□□□ 0.2
Zfp28P10078 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zfp28P10078 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp28P10078 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp28P10078 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.27■□□□□ 0.2
Zfp28P10078 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Zfp28P10078 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.27■□□□□ 0.2
Zfp28P10078 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Zfp28P10078 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp28P10078 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zfp28P10078 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Zfp28P10078 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zfp28P10078 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms