Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim1P0C8K7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Idnk-204ENSMUST00000226010 1898 ntBASIC12.22□□□□□ -0.45
Smim1P0C8K7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.22□□□□□ -0.45
Smim1P0C8K7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim1P0C8K7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.21□□□□□ -0.45
Smim1P0C8K7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smim1P0C8K7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Smim1P0C8K7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim1P0C8K7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Smim1P0C8K7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smim1P0C8K7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms