Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa9P09631 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.81■□□□□ 0.44
Hoxa9P09631 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.81■□□□□ 0.44
Hoxa9P09631 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa9P09631 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa9P09631 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa9P09631 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxa9P09631 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hoxa9P09631 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hoxa9P09631 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.8■□□□□ 0.44
Hoxa9P09631 Gm6659-201ENSMUST00000174752 547 ntBASIC17.8■□□□□ 0.44
Hoxa9P09631 Gm10517-202ENSMUST00000192970 758 ntBASIC17.8■□□□□ 0.44
Hoxa9P09631 Gm18959-201ENSMUST00000208954 655 ntBASIC17.8■□□□□ 0.44
Hoxa9P09631 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Hoxa9P09631 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hoxa9P09631 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hoxa9P09631 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hoxa9P09631 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Hoxa9P09631 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.79■□□□□ 0.44
Hoxa9P09631 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.79■□□□□ 0.44
Hoxa9P09631 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.79■□□□□ 0.44
Hoxa9P09631 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.79■□□□□ 0.44
Hoxa9P09631 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hoxa9P09631 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa9P09631 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa9P09631 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxa9P09631 Gm38027-201ENSMUST00000192315 235 ntBASIC17.78■□□□□ 0.44
Hoxa9P09631 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa9P09631 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa9P09631 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Hoxa9P09631 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa9P09631 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa9P09631 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.78■□□□□ 0.44
Hoxa9P09631 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxa9P09631 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.77■□□□□ 0.44
Hoxa9P09631 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa9P09631 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa9P09631 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.77■□□□□ 0.44
Hoxa9P09631 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hoxa9P09631 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxa9P09631 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Hoxa9P09631 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa9P09631 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa9P09631 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa9P09631 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa9P09631 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa9P09631 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa9P09631 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hoxa9P09631 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Gm10418-201ENSMUST00000100943 576 ntBASIC17.76■□□□□ 0.43
Hoxa9P09631 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.76■□□□□ 0.43
Hoxa9P09631 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.76■□□□□ 0.43
Hoxa9P09631 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa9P09631 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Gm45058-201ENSMUST00000205810 766 ntBASIC17.76■□□□□ 0.43
Hoxa9P09631 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa9P09631 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.76■□□□□ 0.43
Hoxa9P09631 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa9P09631 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hoxa9P09631 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Gm12085-201ENSMUST00000119263 940 ntBASIC17.75■□□□□ 0.43
Hoxa9P09631 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.75■□□□□ 0.43
Hoxa9P09631 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hoxa9P09631 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.75■□□□□ 0.43
Hoxa9P09631 Gm4974-201ENSMUST00000209974 875 ntBASIC17.75■□□□□ 0.43
Hoxa9P09631 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa9P09631 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa9P09631 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms