Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hoxa1P09022 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa1P09022 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hoxa1P09022 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Hoxa1P09022 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxa1P09022 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.46□□□□□ -0.09
Hoxa1P09022 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxa1P09022 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxa1P09022 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.46□□□□□ -0.09
Hoxa1P09022 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
Hoxa1P09022 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxa1P09022 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa1P09022 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxa1P09022 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Hoxa1P09022 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa1P09022 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.45□□□□□ -0.1
Hoxa1P09022 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa1P09022 AV356131-201ENSMUST00000206201 750 ntBASIC14.45□□□□□ -0.1
Hoxa1P09022 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa1P09022 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa1P09022 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxa1P09022 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa1P09022 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxa1P09022 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxa1P09022 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa1P09022 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms