Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04945 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04945 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04945 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04945 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04945 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.17■□□□□ 0.02
P04945 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
P04945 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.17■□□□□ 0.02
P04945 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.17■□□□□ 0.02
P04945 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.17■□□□□ 0.02
P04945 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
P04945 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Gm12896-201ENSMUST00000118430 226 ntBASIC15.17■□□□□ 0.02
P04945 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.17■□□□□ 0.02
P04945 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.17■□□□□ 0.02
P04945 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.17■□□□□ 0.02
P04945 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.17■□□□□ 0.02
P04945 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.17■□□□□ 0.02
P04945 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04945 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.16■□□□□ 0.02
P04945 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.16■□□□□ 0.02
P04945 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P04945 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P04945 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04945 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.15■□□□□ 0.02
P04945 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.15■□□□□ 0.02
P04945 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.15■□□□□ 0.02
P04945 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
P04945 Gm15375-201ENSMUST00000119510 849 ntBASIC15.15■□□□□ 0.02
P04945 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.15■□□□□ 0.02
P04945 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P04945 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P04945 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Gm13401-201ENSMUST00000117074 291 ntBASIC15.14■□□□□ 0.01
P04945 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.14■□□□□ 0.01
P04945 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
P04945 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
P04945 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04945 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.13■□□□□ 0.01
P04945 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.13■□□□□ 0.01
P04945 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.13■□□□□ 0.01
P04945 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.13■□□□□ 0.01
P04945 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
P04945 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.13■□□□□ 0.01
P04945 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.13■□□□□ 0.01
P04945 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.13■□□□□ 0.01
P04945 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P04945 Gm20049-201ENSMUST00000219950 730 ntBASIC15.13■□□□□ 0.01
P04945 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04945 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms