Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01878 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01878 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01878 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01878 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.31■□□□□ 0.52
P01878 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.3■□□□□ 0.52
P01878 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
P01878 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.3■□□□□ 0.52
P01878 Gm9731-201ENSMUST00000209480 747 ntBASIC18.3■□□□□ 0.52
P01878 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.3■□□□□ 0.52
P01878 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01878 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
P01878 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
P01878 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
P01878 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
P01878 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01878 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01878 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01878 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01878 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01878 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
P01878 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Gm13474-201ENSMUST00000122466 815 ntBASIC18.28■□□□□ 0.52
P01878 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
P01878 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
P01878 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P01878 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
P01878 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
P01878 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P01878 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P01878 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01878 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
P01878 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01878 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01878 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01878 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01878 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01878 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01878 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01878 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
P01878 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.26■□□□□ 0.51
P01878 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.26■□□□□ 0.51
P01878 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
P01878 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
P01878 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
P01878 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.26■□□□□ 0.51
P01878 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.26■□□□□ 0.51
P01878 Gm37025-201ENSMUST00000195159 829 ntBASIC18.26■□□□□ 0.51
P01878 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
P01878 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.26■□□□□ 0.51
P01878 Gm21559-201ENSMUST00000220638 855 ntBASIC18.26■□□□□ 0.51
P01878 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Gm8587-201ENSMUST00000076538 843 ntBASIC18.26■□□□□ 0.51
P01878 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Idnk-204ENSMUST00000226010 1898 ntBASIC18.26■□□□□ 0.51
P01878 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
P01878 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01878 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
P01878 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P01878 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 Mir1668-201ENSMUST00000184114 107 ntBASIC18.25■□□□□ 0.51
P01878 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.25■□□□□ 0.51
P01878 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
P01878 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01878 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms