Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
P01728 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
P01728 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.9□□□□□ -0.19
P01728 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
P01728 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.89□□□□□ -0.19
P01728 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
P01728 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
P01728 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
P01728 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
P01728 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
P01728 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.89□□□□□ -0.19
P01728 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
P01728 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.89□□□□□ -0.19
P01728 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.88□□□□□ -0.19
P01728 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
P01728 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.87□□□□□ -0.19
P01728 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Gm26833-201ENSMUST00000180899 440 ntBASIC13.87□□□□□ -0.19
P01728 Mir8112-201ENSMUST00000184382 131 ntBASIC13.87□□□□□ -0.19
P01728 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
P01728 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.87□□□□□ -0.19
P01728 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
P01728 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
P01728 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
P01728 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
P01728 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
P01728 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.86□□□□□ -0.19
P01728 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.86□□□□□ -0.19
P01728 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.86□□□□□ -0.19
P01728 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
P01728 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.86□□□□□ -0.19
P01728 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
P01728 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
P01728 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.86□□□□□ -0.19
P01728 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
P01728 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
P01728 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
P01728 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.85□□□□□ -0.19
P01728 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.85□□□□□ -0.19
P01728 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.85□□□□□ -0.19
P01728 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
P01728 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
P01728 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms