Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.2■□□□□ 0.5
Syn1O88935 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.2■□□□□ 0.5
Syn1O88935 Gm11355-201ENSMUST00000121120 306 ntBASIC18.2■□□□□ 0.5
Syn1O88935 Mir2861-201ENSMUST00000175539 82 ntBASIC18.2■□□□□ 0.5
Syn1O88935 Gm7791-201ENSMUST00000219066 539 ntBASIC18.2■□□□□ 0.5
Syn1O88935 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syn1O88935 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.2■□□□□ 0.5
Syn1O88935 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Syn1O88935 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.19■□□□□ 0.5
Syn1O88935 Gm27742-201ENSMUST00000184667 60 ntBASIC18.19■□□□□ 0.5
Syn1O88935 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Syn1O88935 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Syn1O88935 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Syn1O88935 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syn1O88935 Gm37935-201ENSMUST00000192012 982 ntBASIC18.18■□□□□ 0.5
Syn1O88935 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syn1O88935 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Syn1O88935 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syn1O88935 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Syn1O88935 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.17■□□□□ 0.5
Syn1O88935 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.17■□□□□ 0.5
Syn1O88935 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.17■□□□□ 0.5
Syn1O88935 Mir8098-201ENSMUST00000184011 137 ntBASIC18.17■□□□□ 0.5
Syn1O88935 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Gm4974-201ENSMUST00000209974 875 ntBASIC18.17■□□□□ 0.5
Syn1O88935 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Gm7213-201ENSMUST00000215977 950 ntBASIC18.17■□□□□ 0.5
Syn1O88935 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.17■□□□□ 0.5
Syn1O88935 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Syn1O88935 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Syn1O88935 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Syn1O88935 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Syn1O88935 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Syn1O88935 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Syn1O88935 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.16■□□□□ 0.5
Syn1O88935 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.16■□□□□ 0.5
Syn1O88935 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.16■□□□□ 0.5
Syn1O88935 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Syn1O88935 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Syn1O88935 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Syn1O88935 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Syn1O88935 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.15■□□□□ 0.5
Syn1O88935 Gm13884-201ENSMUST00000118103 829 ntBASIC18.15■□□□□ 0.5
Syn1O88935 Gm7638-201ENSMUST00000121348 967 ntBASIC18.15■□□□□ 0.5
Syn1O88935 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.15■□□□□ 0.5
Syn1O88935 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.15■□□□□ 0.5
Syn1O88935 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.15■□□□□ 0.5
Syn1O88935 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Syn1O88935 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Syn1O88935 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Syn1O88935 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Syn1O88935 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Syn1O88935 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Syn1O88935 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.14■□□□□ 0.49
Syn1O88935 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.14■□□□□ 0.49
Syn1O88935 Birc2-201ENSMUST00000054878 378 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms